PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID 30131.m007011
Common NameLOC8285288, RCOM_1446140
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Acalyphoideae; Acalypheae; Ricinus
Family C2H2
Protein Properties Length: 180aa    MW: 20329.5 Da    PI: 6.785
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
30131.m007011genomeJCVIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H214.10.000145476123
                   EEETTTTEEESSHHHHHHHHHHT CS
        zf-C2H2  1 ykCpdCgksFsrksnLkrHirtH 23
                   ++C +C++ F ++  L  H++ H
  30131.m007011 54 FQCLYCPRKFYTSQALGGHQNAH 76
                   89******************988 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF576676.38E-65181No hitNo description
PROSITE profilePS5015710.8455481IPR007087Zinc finger, C2H2
PROSITE patternPS0002805676IPR007087Zinc finger, C2H2
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0009909Biological Processregulation of flower development
GO:0010582Biological Processfloral meristem determinacy
GO:0046872Molecular Functionmetal ion binding
Sequence ? help Back to Top
Protein Sequence    Length: 180 aa     Download sequence    Send to blast
MADPSIYNFF NQQQNQPQQQ QQQQQQEQLP FPSSRPSRKN PIPQQPPTSS SRLFQCLYCP  60
RKFYTSQALG GHQNAHKRER AAAHRNLSLQ SPPNISAHYF PPDPYMMNHP DAAPFLDDHH  120
HYYCLEPKQT MTDYQFPSPP QVGFCGGSTA SSALNAIDDS LSPVADLNAD PVNLDLTLHL
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_002512878.11e-129PREDICTED: zinc finger protein GIS2
TrEMBLB9RH191e-129B9RH19_RICCO; Putative uncharacterized protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF15014811
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G14010.11e-18C2H2 family protein